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Cheap flights from South Africa to Mombasa from R5 644

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 9/6. Fares are subject to change and may not be available on all flights or dates of travel.
JNB — MBA
Jun 24 — Jul 11
1 adult
1 adult, Economy, 0 bags

Cheap flight deals from South Africa to Mombasa

Enter your travel dates to find the best prices.

Cheapest flights from South Africa to Mombasa
Explore the most affordable flight options available from South Africa to Mombasa. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 25 May 2026.

Sun 21/616:50
JNB
-
MBA
2 stops20h 45m
RwandAir
Sun 28/617:00
MBA
-
JNB
2 stops10h 20m
RwandAir
Deal found 24/5R7 996
Thu 4/616:50
JNB
-
MBA
2 stops20h 45m
RwandAir
Sun 14/617:00
MBA
-
JNB
2 stops10h 20m
RwandAir
Deal found 21/5R8 177
Thu 24/916:50
JNB
-
MBA
2 stops20h 45m
RwandAir
Sun 27/917:00
MBA
-
JNB
2 stops10h 20m
RwandAir
Deal found 20/5R8 260
Fri 5/612:10
JNB
-
MBA
1 stop7h 00m
Kenya Airways
Tue 16/621:00
MBA
-
JNB
1 stop14h 55m
Kenya Airways
Deal found 21/5R8 474
Thu 11/612:10
JNB
-
MBA
1 stop8h 05m
Kenya Airways
Tue 16/66:40
MBA
-
JNB
1 stop29h 15m
Kenya Airways
Deal found 21/5R8 490
Wed 1/712:10
JNB
-
MBA
1 stop7h 05m
Kenya Airways
Tue 7/74:55
MBA
-
JNB
1 stop7h 00m
Kenya Airways
Deal found 20/5R8 523
Thu 4/612:10
JNB
-
MBA
1 stop8h 05m
Kenya Airways
Sat 13/622:00
MBA
-
JNB
1 stop13h 55m
Kenya Airways
Deal found 20/5R8 539
Thu 4/612:10
JNB
-
MBA
1 stop8h 05m
Kenya Airways
Thu 11/64:55
MBA
-
JNB
1 stop7h 00m
Kenya Airways
Deal found 21/5R8 572
Sat 6/612:10
JNB
-
MBA
1 stop7h 00m
Kenya Airways
Sun 14/64:55
MBA
-
JNB
1 stop7h 00m
Kenya Airways
Deal found 21/5R8 589
Thu 11/612:10
JNB
-
MBA
1 stop8h 05m
Kenya Airways
Mon 15/620:55
MBA
-
JNB
1 stop15h 00m
Kenya Airways
Deal found 21/5R8 622
Mon 6/76:45
CPT
-
MBA
2 stops14h 40m
Multiple Airlines
Mon 13/77:45
MBA
-
CPT
2 stops31h 15m
Multiple Airlines
Deal found 22/5R10 662
Sat 23/514:20
CPT
-
MBA
1 stop9h 39m
Kenya Airways
Thu 28/522:00
MBA
-
CPT
2 stops16h 35m
Kenya Airways
Deal found 21/5R11 139

Find flight deals from South Africa to Mombasa

Keep the following information in mind while searching for South Africa to Mombasa flight deals. Data was last updated 25 May 2026.

Round-trip from

R7 996

One-way from

R5 644

Popular in

July

Cheapest in

May

Average price

R7 815
RwandAir
  • RwandAir
  • 21/6-28/6
  • 4 total stops
  • 31h 05m total
  • South Africa to Mombasa
Search Deals
RwandAir
  • RwandAir
  • 9/6
  • 2 total stops
  • 10h 25m total
  • South Africa to Mombasa
Search Deals
Highest demand for flights based on searches. 2% potential increase in price (R3 536 potential increase over avg. return price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (R1 696 potential savings vs. average return price).
Search Deals
Average for round-trip flights in May 2026
Search Deals

Cheapflights Fare Finder

 
Customise your flight search to find flights from South Africa to Mombasa that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 594 507 searches. Data last updated 25 May 2026.
Use the filters below to find and compare flights from South Africa to Mombasa that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest return flight

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Thu 29/10

16:50-14:35

2 stops20h 45m

Mombasa Moi Intl

Mon 2/11

17:00-14:20

2 stops22h 20m

R8 671

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Thu 18/6

12:10-0:59

1 stop11h 49m

Mombasa Moi Intl

Mon 22/6

21:00-10:55

1 stop14h 55m

R9 148
Fastest return journey

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Wed 23/9

1:15-9:00

1 stop6h 45m

Mombasa Moi Intl

Sun 27/9

4:55-10:55

1 stop7h 00m

R9 362

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Wed 23/9

1:15-9:00

1 stop6h 45m

Mombasa Moi Intl

Thu 1/10

4:55-10:55

1 stop7h 00m

R9 444

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Sun 5/7

16:50-14:35

2 stops20h 45m

Mombasa Moi Intl

Sun 12/7

17:00-2:20

2 stops10h 20m

R10 711

Cape TownMombasa

CPT - MBA

CPTMBA

Cape Town Intl

Mon 6/7

14:25-0:59

2 stops9h 34m

Mombasa Moi Intl

Mon 13/7

20:55-6:00

1 stop10h 05m

R11 172

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Tue 2/6

3:10-14:35

2 stops10h 25m

Mombasa Moi Intl

Wed 17/6

17:00-14:20

2 stops22h 20m

R11 435

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Thu 4/6

16:50-14:35

2 stops20h 45m

Mombasa Moi Intl

Wed 17/6

17:00-14:20

2 stops22h 20m

R11 435

JohannesburgMombasa

JNB - MBA

JNBMBA

Johannesburg OR Tambo

Thu 18/6

16:50-14:35

2 stops20h 45m

Mombasa Moi Intl

Mon 22/6

17:00-2:20

2 stops10h 20m

R11 715

Cape TownMombasa

CPT - MBA

CPTMBA

Cape Town Intl

Tue 16/6

14:25-9:00

2 stops17h 35m

Mombasa Moi Intl

Fri 19/6

20:55-13:00

1 stop17h 05m

R12 060

Flights are sorted by cheapest return flights first.

Deals found on 21/5

Showing 1-10 of 25 resultsSorted by cheapest first
1
2
3

Best time to book a flight from South Africa to Mombasa

Have a flexible travel schedule? Discover the best time to fly to Mombasa from South Africa with our price prediction graph.
Estimated return price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from South Africa to Mombasa

What is the cheapest month to book a flight from South Africa to Mombasa?

Currently, February is the cheapest month in which you can book a flight from South Africa to Mombasa (average of R3 883). Flying from South Africa to Mombasa in September is currently the most expensive (average of R7 272). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How far ahead should I book a flight from South Africa to Mombasa?

To ensure you get the cheapest price possible for a flight from South Africa to Mombasa, you should look to book at least 65 days in advance of your intended travel date. The price of your flight may increase if you delay and leave booking until a week or so before departure.

Reviews of airlines servicing Mombasa

Get insights into the airlines that provide service to Mombasa. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Mombasa. Reviews last updated 25 May 2026.
Check out reviews from past customers who have flown with RwandAir,South African, andEthiopian Air from South Africa to Mombasa to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
RwandAir
7,8
Good
42 reviews
Check prices

Comfort

7,7

Crew

8,0

Overall

7,8

Entertainment

6,8

Food

7,4

Boarding

7,9

Reviews

1 / 2
10,0
Excellent

Anonymous,Sept 2025

KGL - NBO

The price of tickets mentioned in your system is not the price charged. You chargeg higher than that on online
RwandAir
7,8
Good
42 reviews
RwandAir
7,8
Good
42 reviews
Check prices

Comfort

7,7

Crew

8,0

Overall

7,8

Entertainment

6,8

Food

7,4

Boarding

7,9

Reviews

1 / 2
10,0
Excellent

Anonymous,Sept 2025

KGL - NBO

The price of tickets mentioned in your system is not the price charged. You chargeg higher than that on online
South African
7,6
Good
62 reviews
RwandAir
7,8
Good
42 reviews
Check prices

Comfort

7,7

Crew

8,0

Overall

7,8

Entertainment

6,8

Food

7,4

Boarding

7,9

Reviews

1 / 2
10,0
Excellent

Anonymous,Sept 2025

KGL - NBO

The price of tickets mentioned in your system is not the price charged. You chargeg higher than that on online
Ethiopian Air
7,2
Good
1 002 reviews
RwandAir
7,8
Good
42 reviews
Check prices

Comfort

7,7

Crew

8,0

Overall

7,8

Entertainment

6,8

Food

7,4

Boarding

7,9

Reviews

1 / 2
10,0
Excellent

Anonymous,Sept 2025

KGL - NBO

The price of tickets mentioned in your system is not the price charged. You chargeg higher than that on online
Kenya Airways
6,7
Okay
303 reviews
RwandAir
7,8
Good
42 reviews
Check prices

Comfort

7,7

Crew

8,0

Overall

7,8

Entertainment

6,8

Food

7,4

Boarding

7,9

Reviews

1 / 2
10,0
Excellent

Anonymous,Sept 2025

KGL - NBO

The price of tickets mentioned in your system is not the price charged. You chargeg higher than that on online

Related info for your journey

Find useful and relevant information for your journey from South Africa to Mombasa. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to Mombasa from South Africa?

    If you book a flight to Mombasa from South Africa, you will be flying to Moi Intl, which is the city’s only airport. Mombasa Moi Intl (MBA) is located 8,0 km from the centre of Mombasa.

  • How long is the flight from South Africa to Mombasa?

    A quick flight from South Africa to Mombasa can take about 11h 49m. RwandAir provides one of the quickest options available for as low as R9 148. Airlines will cover a distance of 2737 km. Both multi-stop and direct flights can be found to your destination and back.

  • What are the cheapest airlines to fly from South Africa to Mombasa one-way?

    To fly one-way, consider booking your trip with RwandAir, which is currently one of the cheapest options available, starting at R2 831. Kenya Airways flights start at R4 853 while deals on Ethiopian Air start at R5 788 one-way.

  • Can I find deals for flights from South Africa to Mombasa that include hotel bookings?

    Yes. In addition to deals on South Africa to Mombasa flights, Cheapflights offers holiday packages that include both flights and hotel.

  • How can I find direct flights from South Africa to Mombasa?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from South Africa to Mombasa.

  • Can I find deals for business class flights from South Africa to Mombasa?

    Yes. Cheapflights offers flight deals from South Africa to Mombasa by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from South Africa to Mombasa?

    Currently, February is the cheapest month in which you can book a flight from South Africa to Mombasa (average of R3 883). Flying from South Africa to Mombasa in September is currently the most expensive (average of R7 272). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for South Africa to Mombasa

See prices for flight routes from nearby airports that may be better suited for you.
OR Tambo to Mombasa flights
Cape Town to Mombasa flights

Top 4 airlines flying from South Africa to Mombasa

Discover the top 4 airlines that operate flights from South Africa to Mombasa. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 594 507 searches. Data last updated 25 May 2026.
AirlineCheapestAverageFlexibilityOn-time
RwandAirCheapestR5 040AverageR6 995FlexibilityNo cancel feeOn-timeN/A
Search RwandAir flights
Ethiopian AirCheapestR6 369AverageR8 213FlexibilityNo cancel feeOn-time72%
Search Ethiopian Air flights
Kenya AirwaysCheapestR8 300AverageR10 317FlexibilityNo cancel feeOn-time82%
Search Kenya Airways flights
South AfricanCheapestR11 445AverageR12 716FlexibilityNo cancel feeOn-time78%
Search South African flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travellers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from South Africa to Mombasa?

Cheapflights helps you search for flights from South Africa to Mombasa via 900+ travel sites so you don’t have to. After performing a flight search, users can also filter their flight selection by filtering for price, number of stops, airlines, and so on.

Why should you use Cheapflights to find cheap flight tickets from South Africa to Mombasa?

Cheapflights taps into our reliable network of hundreds of airlines and travel agencies to find the best deals for flights from South Africa to Mombasa for you. Better yet — we are completely free to use.

Can Cheapflights find flights from South Africa to Mombasa with no change fees?

Users can book flights with no change fees policies with our dedicated filters. Book flights from South Africa to Mombasa flexibly with Cheapflights today.

Can Cheapflights notify me if prices for flights from South Africa to Mombasa become cheaper?

Yes, Cheapflights has a feature called Price Alert, which notifies users when flight prices change. Track prices for your flight to Mombasa from South Africa today and book when prices fit your budget.

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